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cct2 chaperonin containing TCP1, subunit 2 (beta) [ Channa argus (northern snakehead) ]

Gene ID: 137106720, updated on 21-Aug-2024

Summary

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Gene symbol
cct2
Gene description
chaperonin containing TCP1, subunit 2 (beta)
Gene type
protein coding
RefSeq status
MODEL
Organism
Channa argus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa
Orthologs
human zebrafish all
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Genomic context

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See cct2 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current Channa argus male v1.0 (GCF_033026475.1) 21 NC_090217.1 (3062833..3070036, complement)

Chromosome 21 - NC_090217.1Genomic Context describing neighboring genes Neighboring gene bestrophin-3-like Neighboring gene nothepsin Neighboring gene myelin regulatory factor-like protein Neighboring gene leucine-rich repeat-containing G-protein coupled receptor 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090217.1 Chromosome 21 Reference Channa argus male v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chaperonin-containing T-complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-complex protein 1 subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033026475.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Channa argus male v1.0 Primary Assembly

Genomic

  1. NC_090217.1 Reference Channa argus male v1.0 Primary Assembly

    Range
    3062833..3070036 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067490422.1 → XP_067346523.1  T-complex protein 1 subunit beta

Nucleotide Protein
Heading Accession and Version

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