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aldh18a1 aldehyde dehydrogenase 18 family, member A1 [ Channa argus (northern snakehead) ]

Gene ID: 137106110, updated on 23-Sep-2024

Summary

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Gene symbol
aldh18a1
Gene description
aldehyde dehydrogenase 18 family, member A1
Locus tag
Q8A73_021187
Gene type
protein coding
RefSeq status
MODEL
Organism
Channa argus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa
Orthologs
human zebrafish all
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Genomic context

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See aldh18a1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current Channa argus male v1.0 (GCF_033026475.1) 20 NC_090216.1 (8874650..8887006, complement)

Chromosome 20 - NC_090216.1Genomic Context describing neighboring genes Neighboring gene crystallin, gamma MX, like 2 Neighboring gene crystallin, gamma MX Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene protein phosphatase 1 regulatory subunit 1B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090216.1 Chromosome 20 Reference Channa argus male v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate-5-semialdehyde dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proline biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-1-pyrroline-5-carboxylate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033026475.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Channa argus male v1.0 Primary Assembly

Genomic

  1. NC_090216.1 Reference Channa argus male v1.0 Primary Assembly

    Range
    8874650..8887006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067489122.1 → XP_067345223.1  delta-1-pyrroline-5-carboxylate synthase isoform X2

  2. XM_067489121.1 → XP_067345222.1  delta-1-pyrroline-5-carboxylate synthase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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