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aif1l allograft inflammatory factor 1-like [ Channa argus (northern snakehead) ]

Gene ID: 137103905, updated on 23-Sep-2024

Summary

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Gene symbol
aif1l
Gene description
allograft inflammatory factor 1-like
Locus tag
Q8A73_019548
Gene type
protein coding
RefSeq status
MODEL
Organism
Channa argus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa
Orthologs
human zebrafish all
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Genomic context

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See aif1l in Genome Data Viewer
Location:
chromosome: 18
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current Channa argus male v1.0 (GCF_033026475.1) 18 NC_090214.1 (5891870..5905218)

Chromosome 18 - NC_090214.1Genomic Context describing neighboring genes Neighboring gene fibrinogen C domain containing 1b Neighboring gene laminin, gamma 3 Neighboring gene protein kinase, AMP-activated, alpha 1 catalytic subunit Neighboring gene tetratricopeptide repeat domain 33

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090214.1 Chromosome 18 Reference Channa argus male v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ruffle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ruffle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
allograft inflammatory factor 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033026475.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Channa argus male v1.0 Primary Assembly

Genomic

  1. NC_090214.1 Reference Channa argus male v1.0 Primary Assembly

    Range
    5891870..5905218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067484658.1 → XP_067340759.1  allograft inflammatory factor 1-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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