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adat2 adenosine deaminase tRNA specific 2 [ Channa argus (northern snakehead) ]

Gene ID: 137102560, updated on 23-Sep-2024

Summary

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Gene symbol
adat2
Gene description
adenosine deaminase tRNA specific 2
Locus tag
Q8A73_018138
Gene type
protein coding
RefSeq status
MODEL
Organism
Channa argus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa
Orthologs
human zebrafish all
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Genomic context

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See adat2 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current Channa argus male v1.0 (GCF_033026475.1) 17 NC_090213.1 (2436122..2438608, complement)

Chromosome 17 - NC_090213.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137102653 Neighboring gene HIVEP zinc finger 2a Neighboring gene androgen-induced 1 (H. sapiens) Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene activating transcription factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090213.1 Chromosome 17 Reference Channa argus male v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA-specific adenosine-34 deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA wobble adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA-specific adenosine deaminase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_033026475.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Channa argus male v1.0 Primary Assembly

Genomic

  1. NC_090213.1 Reference Channa argus male v1.0 Primary Assembly

    Range
    2436122..2438608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067482201.1 → XP_067338302.1  tRNA-specific adenosine deaminase 2

Nucleotide Protein
Heading Accession and Version

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