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fuca2 alpha-L-fucosidase 2 [ Pseudorasbora parva (stone moroko) ]

Gene ID: 137091548, updated on 27-Aug-2024

Summary

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Gene symbol
fuca2
Gene description
alpha-L-fucosidase 2
See related
EnsemblRapid:ENSPPBG00000015045
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudorasbora parva
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Pseudorasbora
Orthologs
human zebrafish all
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Genomic context

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See fuca2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current ASM2467924v1 (GCF_024679245.1) 10 NC_090181.1 (39240318..39255243, complement)

Chromosome 10 - NC_090181.1Genomic Context describing neighboring genes Neighboring gene gap junction epsilon-1 protein Neighboring gene HIVEP zinc finger 2b Neighboring gene TatD DNase domain containing 3-like Neighboring gene coenzyme Q8A, genome duplicate b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090181.1 Chromosome 10 Reference ASM2467924v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma alpha-L-fucosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024679245.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2467924v1 Primary Assembly

Genomic

  1. NC_090181.1 Reference ASM2467924v1 Primary Assembly

    Range
    39240318..39255243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067456082.1 → XP_067312183.1  plasma alpha-L-fucosidase isoform X2

  2. XM_067456081.1 → XP_067312182.1  plasma alpha-L-fucosidase isoform X1

    Related
    ENSPPBP00000018585.1, ENSPPBT00000027242.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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