U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

lss lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [ Pseudorasbora parva (stone moroko) ]

Gene ID: 137076152, updated on 27-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
lss
Gene description
lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
See related
EnsemblRapid:ENSPPBG00000025285
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudorasbora parva
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Pseudorasbora
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See lss in Genome Data Viewer
Location:
chromosome: 5
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_08 current ASM2467924v1 (GCF_024679245.1) 5 NC_090176.1 (39772423..39781199)

Chromosome 5 - NC_090176.1Genomic Context describing neighboring genes Neighboring gene sterol 26-hydroxylase, mitochondrial-like Neighboring gene minichromosome maintenance complex component 3 associated protein Neighboring gene leishmanolysin-like (metallopeptidase M8 family) Neighboring gene oxysterol binding protein-like 11 Neighboring gene transforming growth factor beta receptor-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_090176.1 Chromosome 5 Reference ASM2467924v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lanosterol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triterpenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lanosterol synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_024679245.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2467924v1 Primary Assembly

Genomic

  1. NC_090176.1 Reference ASM2467924v1 Primary Assembly

    Range
    39772423..39781199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067445093.1 → XP_067301194.1  lanosterol synthase isoform X1

    Related
    ENSPPBP00000039618.1, ENSPPBT00000051037.1

  2. XM_067445094.1 → XP_067301195.1  lanosterol synthase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.