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dclre1c DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [ Pseudorasbora parva (stone moroko) ]

Gene ID: 137048986, updated on 27-Aug-2024

Summary

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Gene symbol
dclre1c
Gene description
DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
See related
EnsemblRapid:ENSPPBG00000024629
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudorasbora parva
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Pseudorasbora
Orthologs
human zebrafish all
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Genomic context

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See dclre1c in Genome Data Viewer
Location:
chromosome: 20
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_08 current ASM2467924v1 (GCF_024679245.1) 20 NC_090191.1 (38370340..38374758, complement)

Chromosome 20 - NC_090191.1Genomic Context describing neighboring genes Neighboring gene cerebral dopamine neurotrophic factor Neighboring gene heat shock protein 14 Neighboring gene meiosis/spermiogenesis associated 1 Neighboring gene uncharacterized LOC137048991 Neighboring gene transmembrane protein 243, mitochondrial b Neighboring gene NADH:ubiquinone oxidoreductase subunit A5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090191.1 Chromosome 20 Reference ASM2467924v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' DNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via nonhomologous end joining IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein artemis

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024679245.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2467924v1 Primary Assembly

Genomic

  1. NC_090191.1 Reference ASM2467924v1 Primary Assembly

    Range
    38370340..38374758 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067427367.1 → XP_067283468.1  protein artemis

    Related
    ENSPPBP00000038093.1, ENSPPBT00000049395.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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