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npl N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) [ Pseudorasbora parva (stone moroko) ]

Gene ID: 137038944, updated on 27-Aug-2024

Summary

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Gene symbol
npl
Gene description
N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
See related
EnsemblRapid:ENSPPBG00000020088
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudorasbora parva
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Gobionidae; Sarcocheilichthyinae; Pseudorasbora
Orthologs
human zebrafish all
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Genomic context

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See npl in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current ASM2467924v1 (GCF_024679245.1) 13 NC_090184.1 (32518003..32523593, complement)

Chromosome 13 - NC_090184.1Genomic Context describing neighboring genes Neighboring gene notch receptor 2 Neighboring gene SEC22 homolog B, vesicle trafficking protein b Neighboring gene ER degradation enhancer, mannosidase alpha-like 3 Neighboring gene uncharacterized LOC137038946

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090184.1 Chromosome 13 Reference ASM2467924v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylneuraminate lyase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024679245.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2467924v1 Primary Assembly

Genomic

  1. NC_090184.1 Reference ASM2467924v1 Primary Assembly

    Range
    32518003..32523593 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067413985.1 → XP_067270086.1  N-acetylneuraminate lyase

    Related
    ENSPPBP00000029122.1, ENSPPBT00000038910.1
Nucleotide Protein
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