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chrac1 chromatin accessibility complex subunit 1 [ Chanodichthys erythropterus (predatory carp) ]

Gene ID: 137037458, updated on 27-Aug-2024

Summary

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Gene symbol
chrac1
Gene description
chromatin accessibility complex subunit 1
See related
EnsemblRapid:ENSCEYG00000002036
Gene type
protein coding
RefSeq status
MODEL
Organism
Chanodichthys erythropterus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Chanodichthys
Orthologs
human zebrafish all
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Genomic context

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See chrac1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current ASM2448905v1 (GCF_024489055.1) 15 NC_090235.1 (20375787..20377207)

Chromosome 15 - NC_090235.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin superfamily DCC subclass member 3 Neighboring gene CREB regulated transcription coactivator 2 Neighboring gene uncharacterized si:ch211-57n23.1 Neighboring gene argonaute RISC catalytic component 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090235.1 Chromosome 15 Reference ASM2448905v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CHRAC IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromatin accessibility complex protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024489055.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2448905v1 Primary Assembly

Genomic

  1. NC_090235.1 Reference ASM2448905v1 Primary Assembly

    Range
    20375787..20377207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067411457.1 → XP_067267558.1  chromatin accessibility complex protein 1

    Related
    ENSCEYP00000002398.1, ENSCEYT00000003102.1
Nucleotide Protein
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Gene LinkOut

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