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rrp1 ribosomal RNA processing 1 [ Chanodichthys erythropterus (predatory carp) ]

Gene ID: 137036516, updated on 21-Aug-2024

Summary

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Gene symbol
rrp1
Gene description
ribosomal RNA processing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Chanodichthys erythropterus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Chanodichthys
Orthologs
human zebrafish all
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Genomic context

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See rrp1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current ASM2448905v1 (GCF_024489055.1) 14 NC_090234.1 (1984863..1994926)

Chromosome 14 - NC_090234.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137036520 Neighboring gene uncharacterized LOC137036524 Neighboring gene claudin 10b Neighboring gene claudin 10-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090234.1 Chromosome 14 Reference ASM2448905v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, small subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosomal RNA processing protein 1 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024489055.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2448905v1 Primary Assembly

Genomic

  1. NC_090234.1 Reference ASM2448905v1 Primary Assembly

    Range
    1984863..1994926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067410742.1 → XP_067266843.1  ribosomal RNA processing protein 1 homolog A

Nucleotide Protein
Heading Accession and Version

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