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ubox5 U-box domain containing 5 [ Chanodichthys erythropterus (predatory carp) ]

Gene ID: 137026183, updated on 27-Aug-2024

Summary

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Gene symbol
ubox5
Gene description
U-box domain containing 5
See related
EnsemblRapid:ENSCEYG00000014724
Gene type
protein coding
RefSeq status
MODEL
Organism
Chanodichthys erythropterus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Xenocyprididae; Xenocypridinae; Chanodichthys
Orthologs
human zebrafish all
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Genomic context

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See ubox5 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current ASM2448905v1 (GCF_024489055.1) 9 NC_090229.1 (2909265..2916728)

Chromosome 9 - NC_090229.1Genomic Context describing neighboring genes Neighboring gene cysteine dioxygenase, type I Neighboring gene transmembrane p24 trafficking protein 7 Neighboring gene arginine vasopressin Neighboring gene chemokine (C-C motif) ligand 27a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090229.1 Chromosome 9 Reference ASM2448905v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-ubiquitin ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 37

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024489055.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2448905v1 Primary Assembly

Genomic

  1. NC_090229.1 Reference ASM2448905v1 Primary Assembly

    Range
    2909265..2916728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067393437.1 → XP_067249538.1  RING finger protein 37 isoform X1

    Related
    ENSCEYP00000026172.1, ENSCEYT00000027999.1

  2. XM_067393439.1 → XP_067249540.1  RING finger protein 37 isoform X1

  3. XM_067393441.1 → XP_067249542.1  RING finger protein 37 isoform X2

  4. XM_067393438.1 → XP_067249539.1  RING finger protein 37 isoform X1

  5. XM_067393440.1 → XP_067249541.1  RING finger protein 37 isoform X1

Nucleotide Protein
Heading Accession and Version

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