U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rrp8 ribosomal RNA processing 8 [ Hoplias malabaricus (trahira) ]

Gene ID: 136688963, updated on 24-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
rrp8
Gene description
ribosomal RNA processing 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Hoplias malabaricus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Erythrinidae; Hoplias
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See rrp8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_07 current fHopMal1.hap1 (GCF_029633855.1) 1 NC_089800.1 (37697805..37706607)

Chromosome 1 - NC_089800.1Genomic Context describing neighboring genes Neighboring gene seryl-tRNA synthetase 2, mitochondrial Neighboring gene dynein heavy chain domain-containing protein 1 Neighboring gene mediator complex subunit 29 Neighboring gene uncharacterized si:ch211-149e23.4 Neighboring gene nectin cell adhesion molecule 3a

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_089800.1 Chromosome 1 Reference fHopMal1.hap1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables methylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to glucose starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rDNA heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by glucose IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin silencing complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of rDNA heterochromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein rrp8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_029633855.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fHopMal1.hap1 Primary Assembly

Genomic

  1. NC_089800.1 Reference fHopMal1.hap1 Primary Assembly

    Range
    37697805..37706607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066662457.1 → XP_066518554.1  uncharacterized protein rrp8

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.