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CCL16 C-C motif chemokine ligand 16 [ Phocoena phocoena (harbor porpoise) ]

Gene ID: 136138865, updated on 26-Jun-2024

Summary

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Gene symbol
CCL16
Gene description
C-C motif chemokine ligand 16
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena phocoena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human all
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Genomic context

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See CCL16 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current mPhoPho1.1 (GCF_963924675.1) 19 NC_089237.1 (25674229..25683334, complement)

Chromosome 19 - NC_089237.1Genomic Context describing neighboring genes Neighboring gene HEAT repeat containing 9 Neighboring gene C-C motif chemokine ligand 5 Neighboring gene C-C motif chemokine 15-like Neighboring gene C-C motif chemokine 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089237.1 Chromosome 19 Reference mPhoPho1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in eosinophil chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-C motif chemokine 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963924675.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoPho1.1

Genomic

  1. NC_089237.1 Reference mPhoPho1.1

    Range
    25674229..25683334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065897727.1 → XP_065753799.1  C-C motif chemokine 16

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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