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POM121C POM121 transmembrane nucleoporin C [ Phocoena phocoena (harbor porpoise) ]

Gene ID: 136134597, updated on 26-Jun-2024

Summary

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Gene symbol
POM121C
Gene description
POM121 transmembrane nucleoporin C
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena phocoena
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See POM121C in Genome Data Viewer
Location:
chromosome: 15
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_06 current mPhoPho1.1 (GCF_963924675.1) 15 NC_089233.1 (9026244..9047420)

Chromosome 15 - NC_089233.1Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 26 Neighboring gene huntingtin interacting protein 1 Neighboring gene small nucleolar RNA SNORA25 Neighboring gene NOP2/Sun RNA methyltransferase 5 Neighboring gene tripartite motif containing 50

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089233.1 Chromosome 15 Reference mPhoPho1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear envelope pore membrane protein POM 121C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963924675.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoPho1.1

Genomic

  1. NC_089233.1 Reference mPhoPho1.1

    Range
    9026244..9047420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065892242.1 → XP_065748314.1  nuclear envelope pore membrane protein POM 121C isoform X1

  2. XM_065892243.1 → XP_065748315.1  nuclear envelope pore membrane protein POM 121C isoform X2

  3. XM_065892245.1 → XP_065748317.1  nuclear envelope pore membrane protein POM 121C isoform X3

Nucleotide Protein
Heading Accession and Version

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