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TASOR transcription activation suppressor [ Emys orbicularis (European pond turtle) ]

Gene ID: 135881760, updated on 20-May-2024

Summary

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Gene symbol
TASOR
Gene description
transcription activation suppressor
Gene type
protein coding
RefSeq status
MODEL
Organism
Emys orbicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Emys
Orthologs
human mouse all
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Genomic context

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See TASOR in Genome Data Viewer
Location:
chromosome: 7
Exon count:
25
Annotation release Status Assembly Chr Location
RS_2024_05 current rEmyOrb1.hap1 (GCF_028017835.1) 7 NC_088689.1 (105923051..105975968, complement)

Chromosome 7 - NC_088689.1Genomic Context describing neighboring genes Neighboring gene ELKS/RAB6-interacting/CAST family member 2 Neighboring gene coiled-coil domain containing 66 Neighboring gene Rho guanine nucleotide exchange factor 3 Neighboring gene interleukin 17 receptor D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088689.1 Chromosome 7 Reference rEmyOrb1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of gene expression, epigenetic IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA methylation-dependent heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to heterochromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heterochromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein TASOR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028017835.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rEmyOrb1.hap1

Genomic

  1. NC_088689.1 Reference rEmyOrb1.hap1

    Range
    105923051..105975968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065408465.1 → XP_065264537.1  protein TASOR isoform X3

  2. XM_065408463.1 → XP_065264535.1  protein TASOR isoform X2

  3. XM_065408462.1 → XP_065264534.1  protein TASOR isoform X1

  4. XM_065408468.1 → XP_065264540.1  protein TASOR isoform X6

  5. XM_065408467.1 → XP_065264539.1  protein TASOR isoform X5

  6. XM_065408466.1 → XP_065264538.1  protein TASOR isoform X4

Nucleotide Protein
Heading Accession and Version