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LOC135473027 alkylated DNA repair protein alkB homolog 8-like [ Liolophura japonica ]

Gene ID: 135473027, updated on 2-May-2024

Summary

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Gene symbol
LOC135473027
Gene description
alkylated DNA repair protein alkB homolog 8-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Liolophura japonica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Polyplacophora; Neoloricata; Chitonida; Chitonina; Chitonidae; Acanthopleurinae; Liolophura
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Genomic context

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See LOC135473027 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_04 current CUHK_Ljap_v2 (GCF_032854445.1) 8 NC_088302.1 (55426235..55434378, complement)

Chromosome 8 - NC_088302.1Genomic Context describing neighboring genes Neighboring gene protein THEM6-like Neighboring gene GDNF-inducible zinc finger protein 1-like Neighboring gene THO complex subunit 2-like Neighboring gene uncharacterized LOC135474110

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088302.1 Chromosome 8 Reference CUHK_Ljap_v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_032854445.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CUHK_Ljap_v2 Primary Assembly

Genomic

  1. NC_088302.1 Reference CUHK_Ljap_v2 Primary Assembly

    Range
    55426235..55434378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064752800.1 → XP_064608870.1  alkylated DNA repair protein alkB homolog 8-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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