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LOC135469617 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [ Liolophura japonica ]

Gene ID: 135469617, updated on 2-May-2024

Summary

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Gene symbol
LOC135469617
Gene description
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Liolophura japonica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Polyplacophora; Neoloricata; Chitonida; Chitonina; Chitonidae; Acanthopleurinae; Liolophura
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Genomic context

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See LOC135469617 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_04 current CUHK_Ljap_v2 (GCF_032854445.1) 7 NC_088301.1 (34788942..34814127)

Chromosome 7 - NC_088301.1Genomic Context describing neighboring genes Neighboring gene probable splicing factor YJU2B Neighboring gene uncharacterized LOC135469869 Neighboring gene DEP domain-containing protein 1B-like Neighboring gene NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088301.1 Chromosome 7 Reference CUHK_Ljap_v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_032854445.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CUHK_Ljap_v2 Primary Assembly

Genomic

  1. NC_088301.1 Reference CUHK_Ljap_v2 Primary Assembly

    Range
    34788942..34814127
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064748125.1 → XP_064604195.1  LOW QUALITY PROTEIN: protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

Nucleotide Protein
Heading Accession and Version

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