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TIRAP TIR domain containing adaptor protein [ Zonotrichia leucophrys gambelii ]

Gene ID: 135457533, updated on 3-Aug-2024

Summary

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Gene symbol
TIRAP
Gene description
TIR domain containing adaptor protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia leucophrys gambelii (sub-species: gambelii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See TIRAP in Genome Data Viewer
Location:
chromosome: 24
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current RI_Zleu_2.0 (GCF_028769735.1) 24 NC_088193.1 (6292412..6297780)

Chromosome 24 - NC_088193.1Genomic Context describing neighboring genes Neighboring gene SRP receptor subunit alpha Neighboring gene family with sequence similarity 118 member B Neighboring gene decapping enzyme, scavenger Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088193.1 Chromosome 24 Reference RI_Zleu_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Toll-like receptor 2 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Toll-like receptor 4 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of chemokine (C-X-C motif) ligand 2 production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of tumor necrosis factor production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of stress-activated MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor 4 signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll/interleukin-1 receptor domain-containing adapter protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028769735.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RI_Zleu_2.0

Genomic

  1. NC_088193.1 Reference RI_Zleu_2.0

    Range
    6292412..6297780
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064732201.1 → XP_064588271.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X2

  2. XM_064732200.1 → XP_064588270.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X2

  3. XM_064732198.1 → XP_064588268.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

  4. XM_064732199.1 → XP_064588269.1  toll/interleukin-1 receptor domain-containing adapter protein isoform X1

Nucleotide Protein
Heading Accession and Version

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