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ALKBH8 alkB homolog 8, tRNA methyltransferase [ Zonotrichia leucophrys gambelii ]

Gene ID: 135450231, updated on 3-Aug-2024

Summary

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Gene symbol
ALKBH8
Gene description
alkB homolog 8, tRNA methyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Zonotrichia leucophrys gambelii (sub-species: gambelii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Zonotrichia
Orthologs
human mouse all
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Genomic context

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See ALKBH8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_04 current RI_Zleu_2.0 (GCF_028769735.1) 1 NC_088169.1 (74461138..74502121)

Chromosome 1 - NC_088169.1Genomic Context describing neighboring genes Neighboring gene sarcolipin Neighboring gene ELMO domain containing 1 Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene vitelline membrane outer layer protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088169.1 Chromosome 1 Reference RI_Zleu_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosylmethionine-dependent methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA wobble uridine modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkylated DNA repair protein alkB homolog 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028769735.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RI_Zleu_2.0

Genomic

  1. NC_088169.1 Reference RI_Zleu_2.0

    Range
    74461138..74502121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064718231.1 → XP_064574301.1  alkylated DNA repair protein alkB homolog 8

Nucleotide Protein
Heading Accession and Version

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