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LOC135216677 irregular chiasm C-roughest protein-like [ Macrobrachium nipponense ]

Gene ID: 135216677, updated on 5-Apr-2024

Summary

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Gene symbol
LOC135216677
Gene description
irregular chiasm C-roughest protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Macrobrachium nipponense
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea; Palaemonoidea; Palaemonidae; Macrobrachium
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Genomic context

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See LOC135216677 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_03 current ASM1510439v2 (GCF_015104395.2) 6 NC_061108.1 (13152260..13170318, complement)

Chromosome 6 - NC_061108.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit Trs33 Neighboring gene atrophin-1-like Neighboring gene irregular chiasm C-roughest protein-like Neighboring gene zinc finger protein 569-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061108.1 Chromosome 6 Reference ASM1510439v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015104395.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1510439v2 Primary Assembly

Genomic

  1. NC_061108.1 Reference ASM1510439v2 Primary Assembly

    Range
    13152260..13170318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064252074.1 → XP_064108144.1  irregular chiasm C-roughest protein-like isoform X2

  2. XM_064252073.1 → XP_064108143.1  irregular chiasm C-roughest protein-like isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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