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LOC135213542 irregular chiasm C-roughest protein-like [ Macrobrachium nipponense ]

Gene ID: 135213542, updated on 5-Apr-2024

Summary

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Gene symbol
LOC135213542
Gene description
irregular chiasm C-roughest protein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Macrobrachium nipponense
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea; Palaemonoidea; Palaemonidae; Macrobrachium
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Genomic context

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See LOC135213542 in Genome Data Viewer
Location:
chromosome: 43
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_03 current ASM1510439v2 (GCF_015104395.2) 43 NC_061104.1 (16326169..16548191, complement)

Chromosome 43 - NC_061104.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135213796 Neighboring gene uncharacterized protein DDB_G0271670-like Neighboring gene uncharacterized LOC135213829 Neighboring gene uncharacterized LOC135213830

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061104.1 Chromosome 43 Reference ASM1510439v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015104395.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1510439v2 Primary Assembly

Genomic

  1. NC_061104.1 Reference ASM1510439v2 Primary Assembly

    Range
    16326169..16548191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064247493.1 → XP_064103563.1  irregular chiasm C-roughest protein-like

Nucleotide Protein
Heading Accession and Version

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