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LOC135213174 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [ Macrobrachium nipponense ]

Gene ID: 135213174, updated on 5-Apr-2024

Summary

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Gene symbol
LOC135213174
Gene description
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Macrobrachium nipponense
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea; Palaemonoidea; Palaemonidae; Macrobrachium
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Genomic context

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See LOC135213174 in Genome Data Viewer
Location:
chromosome: 42
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_03 current ASM1510439v2 (GCF_015104395.2) 42 NC_061103.1 (44263837..44278773)

Chromosome 42 - NC_061103.1Genomic Context describing neighboring genes Neighboring gene protein glass-like Neighboring gene MOB kinase activator 3 Neighboring gene uncharacterized LOC135213175 Neighboring gene UDP-glucose 6-dehydrogenase sgl

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061103.1 Chromosome 42 Reference ASM1510439v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015104395.2-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1510439v2 Primary Assembly

Genomic

  1. NC_061103.1 Reference ASM1510439v2 Primary Assembly

    Range
    44263837..44278773
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064247129.1 → XP_064103199.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X2

  2. XM_064247128.1 → XP_064103198.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X1

  3. XM_064247131.1 → XP_064103201.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X3

Nucleotide Protein
Heading Accession and Version

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