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Snmp1 Sensory neuron membrane protein 1 [ Ostrinia nubilalis (European corn borer) ]

Gene ID: 135078334, updated on 31-Mar-2024

Summary

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Gene symbol
Snmp1
Gene description
Sensory neuron membrane protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrinia nubilalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Pyraloidea; Crambidae; Pyraustinae; Ostrinia
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Genomic context

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See Snmp1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_03 current ilOstNubi1.1 (GCF_963855985.1) 14 NC_087101.1 (11272175..11329061)

Chromosome 14 - NC_087101.1Genomic Context describing neighboring genes Neighboring gene phospholipase A1-like Neighboring gene uncharacterized LOC135078171 Neighboring gene UDP-glycosyltransferase family 50 member B3 Neighboring gene zinc finger protein 260-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_087101.1 Chromosome 14 Reference ilOstNubi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Asian corn borer pheromone binding protein 3, a candidate for evolving specificity to the 12-tetradecenyl acetate sex pheromone. Allen JE, et al. Insect Biochem Mol Biol, 2011 Mar. PMID 21056664
  2. Using RNA sequencing to characterize female reproductive genes between Z and E Strains of European Corn Borer moth (Ostrinia nubilalis). Al-Wathiqui N, et al. BMC Genomics, 2014 Mar 12. PMID 24621199, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2 iron, 2 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC135078334

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963855985.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilOstNubi1.1

Genomic

  1. NC_087101.1 Reference ilOstNubi1.1

    Range
    11272175..11329061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063972932.1 → XP_063829002.1  uncharacterized protein LOC135078334

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E5EZW6.1 GenPept UniProtKB/Swiss-Prot:E5EZW6