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Arpc1 Actin-related protein 2/3 complex, subunit 1A [ Ostrinia nubilalis (European corn borer) ]

Gene ID: 135077366, updated on 10-Jul-2024

Summary

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Gene symbol
Arpc1
Gene description
Actin-related protein 2/3 complex, subunit 1A
See related
EnsemblRapid:ENSINLG00005004069
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrinia nubilalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Pyraloidea; Crambidae; Pyraustinae; Ostrinia
Orthologs
fruit fly all
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Genomic context

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See Arpc1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_03 current ilOstNubi1.1 (GCF_963855985.1) 13 NC_087100.1 (828253..830191)

Chromosome 13 - NC_087100.1Genomic Context describing neighboring genes Neighboring gene oxysterol-binding protein-related protein 11 Neighboring gene aprataxin and PNK-like factor Neighboring gene Translin associated factor X Neighboring gene ADP ribosylation factor guanine nucleotide exchange factor Sec71 Neighboring gene mitotic checkpoint protein Bub3 Neighboring gene knirps-related protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_087100.1 Chromosome 13 Reference ilOstNubi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation of BAC clones containing conserved genes from libraries of three distantly related moths: a useful resource for comparative genomics of Lepidoptera. Yasukochi Y, et al. J Biomed Biotechnol, 2011. PMID 21127704, Free PMC Article
  2. Using RNA sequencing to characterize female reproductive genes between Z and E Strains of European Corn Borer moth (Ostrinia nubilalis). Al-Wathiqui N, et al. BMC Genomics, 2014 Mar 12. PMID 24621199, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Arp2/3 protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin-related protein 2/3 complex subunit 1A-A
Names
suppressor of profilin 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963855985.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilOstNubi1.1

Genomic

  1. NC_087100.1 Reference ilOstNubi1.1

    Range
    828253..830191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063971891.1 → XP_063827961.1  actin-related protein 2/3 complex subunit 1A-A

    Related
    ENSINLP00005004516.1, ENSINLT00005006579.1
Nucleotide Protein
Heading Accession and Version