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wupA wings up A [ Ostrinia nubilalis (European corn borer) ]

Gene ID: 135073078, updated on 22-May-2024

Summary

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Gene symbol
wupA
Gene description
wings up A
Gene type
protein coding
RefSeq status
MODEL
Organism
Ostrinia nubilalis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Pyraloidea; Crambidae; Pyraustinae; Ostrinia
Orthologs
fruit fly all
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Genomic context

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See wupA in Genome Data Viewer
Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_03 current ilOstNubi1.1 (GCF_963855985.1) 7 NC_087094.1 (4697257..4710936, complement)

Chromosome 7 - NC_087094.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135073080 Neighboring gene skin secretory protein xP2-like Neighboring gene uncharacterized LOC135073474 Neighboring gene uncharacterized LOC135073554

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_087094.1 Chromosome 7 Reference ilOstNubi1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation of BAC clones containing conserved genes from libraries of three distantly related moths: a useful resource for comparative genomics of Lepidoptera. Yasukochi Y, et al. J Biomed Biotechnol, 2011. PMID 21127704, Free PMC Article
  2. Using RNA sequencing to characterize female reproductive genes between Z and E Strains of European Corn Borer moth (Ostrinia nubilalis). Al-Wathiqui N, et al. BMC Genomics, 2014 Mar 12. PMID 24621199, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of troponin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
troponin I

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963855985.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilOstNubi1.1

Genomic

  1. NC_087094.1 Reference ilOstNubi1.1

    Range
    4697257..4710936 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063967102.1 → XP_063823172.1  troponin I isoform X9

  2. XM_063967094.1 → XP_063823164.1  troponin I isoform X2

  3. XM_063967097.1 → XP_063823167.1  troponin I isoform X4

  4. XM_063967096.1 → XP_063823166.1  troponin I isoform X3

  5. XM_063967104.1 → XP_063823174.1  troponin I isoform X11

  6. XM_063967101.1 → XP_063823171.1  troponin I isoform X8

  7. XM_063967105.1 → XP_063823175.1  troponin I isoform X12

  8. XM_063967099.1 → XP_063823169.1  troponin I isoform X6

  9. XM_063967100.1 → XP_063823170.1  troponin I isoform X7

  10. XM_063967098.1 → XP_063823168.1  troponin I isoform X5

  11. XM_063967093.1 → XP_063823163.1  troponin I isoform X1

  12. XM_063967103.1 → XP_063823173.1  troponin I isoform X10

  13. XM_063967107.1 → XP_063823177.1  troponin I isoform X14

  14. XM_063967109.1 → XP_063823179.1  troponin I isoform X16

  15. XM_063967108.1 → XP_063823178.1  troponin I isoform X15

  16. XM_063967106.1 → XP_063823176.1  troponin I isoform X13

Nucleotide Protein
Heading Accession and Version