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kptn kaptin (actin binding protein) [ Eleginops maclovinus (Patagonian blennie) ]

Gene ID: 134872765, updated on 10-Oct-2024

Summary

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Gene symbol
kptn
Gene description
kaptin (actin binding protein)
Locus tag
PBY51_003070
See related
EnsemblRapid:ENSEMLG00005013218
Gene type
protein coding
RefSeq status
MODEL
Organism
Eleginops maclovinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Eleginopidae; Eleginops
Orthologs
human zebrafish all
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_03 current JC_Emac_rtc_rv5 (GCF_036324505.1) 11 NC_086359.1 (16404546..16413116, complement)

Chromosome 11 - NC_086359.1Genomic Context describing neighboring genes Neighboring gene calpain, small subunit 1 a Neighboring gene NOVA alternative splicing regulator 1 Neighboring gene homeobox protein otx5-like Neighboring gene H3 histone, family 3C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086359.1 Chromosome 11 Reference JC_Emac_rtc_rv5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036324505.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JC_Emac_rtc_rv5 Primary Assembly

Genomic

  1. NC_086359.1 Reference JC_Emac_rtc_rv5 Primary Assembly

    Range
    16404546..16413116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063896196.1 → XP_063752266.1  KICSTOR complex protein kaptin

    UniProtKB/TrEMBL
    A0AAN7XE80
    Related
    ENSEMLP00005037284.1, ENSEMLT00005038031.1
Nucleotide Protein
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