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LOC134872179 E3 ubiquitin-protein ligase CBL-like [ Eleginops maclovinus (Patagonian blennie) ]

Gene ID: 134872179, updated on 9-Jul-2024

Summary

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Gene symbol
LOC134872179
Gene description
E3 ubiquitin-protein ligase CBL-like
See related
EnsemblRapid:ENSEMLG00005021613
Gene type
protein coding
RefSeq status
MODEL
Organism
Eleginops maclovinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Eleginopidae; Eleginops
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Genomic context

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See LOC134872179 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_03 current JC_Emac_rtc_rv5 (GCF_036324505.1) 11 NC_086359.1 (1272939..1291981, complement)

Chromosome 11 - NC_086359.1Genomic Context describing neighboring genes Neighboring gene ion channel TACAN-like Neighboring gene melanoma cell adhesion molecule a Neighboring gene alkB homolog 4, lysine demthylase Neighboring gene leucine-rich repeats and WD repeat domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086359.1 Chromosome 11 Reference JC_Emac_rtc_rv5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphotyrosine residue binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBL-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036324505.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JC_Emac_rtc_rv5 Primary Assembly

Genomic

  1. NC_086359.1 Reference JC_Emac_rtc_rv5 Primary Assembly

    Range
    1272939..1291981 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063895352.1 → XP_063751422.1  LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase CBL-like

    Related
    ENSEMLP00005057907.1, ENSEMLT00005060569.1
Nucleotide Protein
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Gene LinkOut

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