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tjp2a tight junction protein 2a (zona occludens 2) [ Eleginops maclovinus (Patagonian blennie) ]

Gene ID: 134868161, updated on 10-Oct-2024

Summary

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Gene symbol
tjp2a
Gene description
tight junction protein 2a (zona occludens 2)
Locus tag
PBY51_023234
See related
EnsemblRapid:ENSEMLG00005021135
Gene type
protein coding
RefSeq status
MODEL
Organism
Eleginops maclovinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Eleginopidae; Eleginops
Orthologs
zebrafish all
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Genomic context

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See tjp2a in Genome Data Viewer
Location:
chromosome: 8
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_03 current JC_Emac_rtc_rv5 (GCF_036324505.1) 8 NC_086356.1 (4059157..4088968)

Chromosome 8 - NC_086356.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134868474 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta a Neighboring gene amyloid-beta A4 precursor protein-binding family A member 1-like Neighboring gene thyroid hormone-induced protein B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086356.1 Chromosome 8 Reference JC_Emac_rtc_rv5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036324505.1-RS_2024_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JC_Emac_rtc_rv5 Primary Assembly

Genomic

  1. NC_086356.1 Reference JC_Emac_rtc_rv5 Primary Assembly

    Range
    4059157..4088968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063889086.1 → XP_063745156.1  tight junction protein ZO-2a isoform X4

    Related
    ENSEMLP00005057009.1, ENSEMLT00005059527.1

  2. XM_063889082.1 → XP_063745152.1  tight junction protein ZO-2a isoform X1

    UniProtKB/TrEMBL
    A0AAN8ADD5
    Related
    ENSEMLP00005057003.1, ENSEMLT00005059521.1

  3. XM_063889085.1 → XP_063745155.1  tight junction protein ZO-2a isoform X3

  4. XM_063889084.1 → XP_063745154.1  tight junction protein ZO-2a isoform X2

    Related
    ENSEMLP00005057001.1, ENSEMLT00005059519.1
Nucleotide Protein
Heading Accession and Version

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