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PHTF1 putative homeodomain transcription factor 1 [ Symphalangus syndactylus (siamang) ]

Gene ID: 134734167, updated on 18-Jul-2024

Summary

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Gene symbol
PHTF1
Gene description
putative homeodomain transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Symphalangus syndactylus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Symphalangus
Orthologs
human mouse all
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Genomic context

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See PHTF1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_07 current NHGRI_mSymSyn1-v2.1_pri (GCF_028878055.3) 12 NC_072441.2 (66324762..66388001, complement)

Chromosome 12 - NC_072441.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134734174 Neighboring gene small ribosomal subunit protein uS19-like Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 3 Neighboring gene round spermatid basic protein 1 Neighboring gene protein tyrosine phosphatase non-receptor type 22

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_072441.2 Chromosome 12 Reference NHGRI_mSymSyn1-v2.1_pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein PHTF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028878055.3-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mSymSyn1-v2.1_pri Primary Assembly

Genomic

  1. NC_072441.2 Reference NHGRI_mSymSyn1-v2.1_pri Primary Assembly

    Range
    66324762..66388001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063625782.1 → XP_063481852.1  protein PHTF1 isoform X6

  2. XM_063625779.1 → XP_063481849.1  protein PHTF1 isoform X4

  3. XM_063625777.1 → XP_063481847.1  protein PHTF1 isoform X3

  4. XM_063625778.1 → XP_063481848.1  protein PHTF1 isoform X3

  5. XM_063625776.1 → XP_063481846.1  protein PHTF1 isoform X3

  6. XM_063625771.1 → XP_063481841.1  protein PHTF1 isoform X1

  7. XM_063625770.1 → XP_063481840.1  protein PHTF1 isoform X1

  8. XM_063625772.1 → XP_063481842.1  protein PHTF1 isoform X2

  9. XM_063625773.1 → XP_063481843.1  protein PHTF1 isoform X2

  10. XM_063625774.1 → XP_063481844.1  protein PHTF1 isoform X2

  11. XM_063625775.1 → XP_063481845.1  protein PHTF1 isoform X2

  12. XM_063625781.1 → XP_063481851.1  protein PHTF1 isoform X5

  13. XM_063625786.1 → XP_063481856.1  protein PHTF1 isoform X8

  14. XM_063625785.1 → XP_063481855.1  protein PHTF1 isoform X7

  15. XM_063625784.1 → XP_063481854.1  protein PHTF1 isoform X7

  16. XM_063625783.1 → XP_063481853.1  protein PHTF1 isoform X7

  17. XM_063625780.1 → XP_063481850.1  protein PHTF1 isoform X5

  18. XM_063625787.1 → XP_063481857.1  protein PHTF1 isoform X9

RNA

  1. XR_010117502.1 RNA Sequence

  2. XR_010117503.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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