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ari-2 E3 ubiquitin-protein ligase ari-2 [ Cydia amplana ]

Gene ID: 134663259, updated on 23-May-2024

Summary

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Gene symbol
ari-2
Gene description
E3 ubiquitin-protein ligase ari-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cydia amplana
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini; Cydia
Orthologs
fruit fly all
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Genomic context

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See ari-2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current ilCydAmpl1.1 (GCF_948474715.1) 4 NC_086072.1 (10481568..10776776, complement)

Chromosome 4 - NC_086072.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134663266 Neighboring gene uncharacterized LOC134647617 Neighboring gene uncharacterized LOC134647452 Neighboring gene uncharacterized LOC134647453 Neighboring gene uncharacterized LOC134663270 Neighboring gene band 4.1-like protein 4 Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene serine/arginine repetitive matrix protein 1-like Neighboring gene uncharacterized LOC134663247 Neighboring gene nicotinic Acetylcholine Receptor alpha7 Neighboring gene nicotinic acetylcholine receptor beta1 Neighboring gene DNA-directed RNA polymerase II subunit RPB1-like Neighboring gene RNA polymerase II subunit RpII215 Neighboring gene ATP-dependent 6-phosphofructokinase Neighboring gene translocating chain-associated membrane protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086072.1 Chromosome 4 Reference ilCydAmpl1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
potential E3 ubiquitin-protein ligase ariadne-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_948474715.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ilCydAmpl1.1

Genomic

  1. NC_086072.1 Reference ilCydAmpl1.1

    Range
    10481568..10776776 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063519669.1 → XP_063375739.1  potential E3 ubiquitin-protein ligase ariadne-2

  2. XM_063519670.1 → XP_063375740.1  potential E3 ubiquitin-protein ligase ariadne-2

Nucleotide Protein
Heading Accession and Version