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guk1b guanylate kinase 1b [ Pelmatolapia mariae (spotted tilapia) ]

Gene ID: 134620100, updated on 24-May-2024

Summary

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Gene symbol
guk1b
Gene description
guanylate kinase 1b
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelmatolapia mariae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Pelmatolapiini; Pelmatolapia
Orthologs
zebrafish all
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Genomic context

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See guk1b in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
9
Annotation release Status Assembly LG Location
RS_2024_05 current Pm_UMD_F_2 (GCF_036321145.2) LG23 NC_086246.1 (50749837..50755506)
RS_2024_02 previous assembly Pm_UMD_F (GCF_036321145.1) LG23 NC_086246.1 (50749837..50755506)

Linkage Group LG23 - NC_086246.1Genomic Context describing neighboring genes Neighboring gene DNA methyltransferase 1 associated protein 1 Neighboring gene ring finger protein 220b Neighboring gene obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF a Neighboring gene uncharacterized LOC134619981 Neighboring gene ALK and LTK ligand 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanylate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in purine nucleotide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanylate kinase 1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036321145.2-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pm_UMD_F_2

Genomic

  1. NC_086246.1 Reference Pm_UMD_F_2

    Range
    50749837..50755506
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063466033.1 → XP_063322103.1  guanylate kinase 1b isoform X1

  2. XM_063466034.1 → XP_063322104.1  guanylate kinase 1b isoform X2

Nucleotide Protein
Heading Accession and Version