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SWIP strumpellin and WASH-interacting protein [ Bacillus rossius redtenbacheri ]

Gene ID: 134539791, updated on 23-May-2024

Summary

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Gene symbol
SWIP
Gene description
strumpellin and WASH-interacting protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Bacillus rossius redtenbacheri (sub-species: redtenbacheri)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Phasmatodea; Verophasmatodea; Areolatae; Bacilloidea; Bacillidae; Bacillinae; Bacillini; Bacillus
Orthologs
fruit fly all
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Genomic context

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See SWIP in Genome Data Viewer
Location:
chromosome: 16
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current Brsri_v3 (GCF_032445375.1) 16 NC_086343.1 (31772537..31847025)

Chromosome 16 - NC_086343.1Genomic Context describing neighboring genes Neighboring gene basement membrane-specific heparan sulfate proteoglycan core protein-like Neighboring gene ketohexokinase-like Neighboring gene Nitric oxide synthase Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene ATP synthase subunit beta, mitochondrial-like Neighboring gene uncharacterized LOC134540098

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086343.1 Chromosome 16 Reference Brsri_v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_032445375.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brsri_v3

Genomic

  1. NC_086343.1 Reference Brsri_v3

    Range
    31772537..31847025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063382055.1 → XP_063238125.1  WASH complex subunit 4 isoform X1

  2. XM_063382056.1 → XP_063238126.1  WASH complex subunit 4 isoform X2

  3. XM_063382058.1 → XP_063238128.1  WASH complex subunit 4 isoform X3

Nucleotide Protein
Heading Accession and Version

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