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LOC134529422 aspartyl/asparaginyl beta-hydroxylase [ Bacillus rossius redtenbacheri ]

Gene ID: 134529422, updated on 10-May-2024

Summary

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Gene symbol
LOC134529422
Gene description
aspartyl/asparaginyl beta-hydroxylase
Gene type
protein coding
RefSeq status
MODEL
Organism
Bacillus rossius redtenbacheri (sub-species: redtenbacheri)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Phasmatodea; Verophasmatodea; Areolatae; Bacilloidea; Bacillidae; Bacillinae; Bacillini; Bacillus
Orthologs
fruit fly all
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Genomic context

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See LOC134529422 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current Brsri_v3 (GCF_032445375.1) 2 NC_086331.1 (84655812..84847094)

Chromosome 2 - NC_086331.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134528913 Neighboring gene sodium/potassium-transporting ATPase subunit beta-1-interacting protein Neighboring gene calaxin Neighboring gene Adenosylhomocysteinase like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086331.1 Chromosome 2 Reference Brsri_v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase; glutamic acid-rich protein; nucleolin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_032445375.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brsri_v3

Genomic

  1. NC_086331.1 Reference Brsri_v3

    Range
    84655812..84847094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063363480.1 → XP_063219550.1  aspartyl/asparaginyl beta-hydroxylase isoform X1

  2. XM_063363483.1 → XP_063219553.1  aspartyl/asparaginyl beta-hydroxylase isoform X4

  3. XM_063363482.1 → XP_063219552.1  aspartyl/asparaginyl beta-hydroxylase isoform X3

  4. XM_063363485.1 → XP_063219555.1  glutamic acid-rich protein isoform X6

  5. XM_063363487.1 → XP_063219557.1  glutamic acid-rich protein isoform X7

  6. XM_063363488.1 → XP_063219558.1  nucleolin isoform X8

  7. XM_063363481.1 → XP_063219551.1  aspartyl/asparaginyl beta-hydroxylase isoform X2

  8. XM_063363484.1 → XP_063219554.1  aspartyl/asparaginyl beta-hydroxylase isoform X5

RNA

  1. XR_010074571.1 RNA Sequence

  2. XR_010074574.1 RNA Sequence

  3. XR_010074573.1 RNA Sequence

  4. XR_010074572.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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