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Hrnr hornerin [ Rattus norvegicus (Norway rat) ]

Gene ID: 134485935, updated on 2-Nov-2024

Summary

Official Symbol
Hrnrprovided by RGD
Official Full Name
hornerinprovided by RGD
Primary source
RGD:1307660
See related
AllianceGenome:RGD:1307660
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1307660
Summary
Predicted to be involved in cell envelope organization and establishment of skin barrier. Predicted to act upstream of or within hematopoietic progenitor cell differentiation. Predicted to be located in keratohyalin granule and perinuclear region of cytoplasm. Predicted to be active in cornified envelope. Orthologous to human HRNR (hornerin). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See Hrnr in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (181650772..181663633)

Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L13, pseudogene 11 Neighboring gene filaggrin Neighboring gene similar to Farnesyl pyrophosphate synthetase (FPP synthetase) Neighboring gene repetin Neighboring gene trichohyalin

Genomic regions, transcripts, and products

Genomic Sequence:
NC_086020.1 Chromosome 2 Reference GRCr8

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in cell envelope organization ISO
Inferred from Sequence Orthology
more info
 
involved_in establishment of skin barrier ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within hematopoietic progenitor cell differentiation ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cornified envelope ISO
Inferred from Sequence Orthology
more info
 
located_in cornified envelope ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in keratohyalin granule ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001433676.1NP_001420605.1  hornerin

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000002

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086020.1 Reference GRCr8

    Range
    181650772..181663633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063282905.1XP_063138975.1  hornerin