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pde9ac phosphodiesterase 9ac [ Trichomycterus rosablanca ]

Gene ID: 134334727, updated on 29-Mar-2024

Summary

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Gene symbol
pde9ac
Gene description
phosphodiesterase 9ac
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichomycterus rosablanca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Trichomycteridae; Trichomycterus
Orthologs
zebrafish all
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Genomic context

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See pde9ac in Genome Data Viewer
Location:
chromosome: 20
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current fTriRos1.hap1 (GCF_030014385.1) 20 NC_086007.1 (25145032..25160281)

Chromosome 20 - NC_086007.1Genomic Context describing neighboring genes Neighboring gene sperm autoantigenic protein 17 Neighboring gene hepatic and glial cell adhesion molecule a Neighboring gene uncharacterized LOC134334754 Neighboring gene OAF homolog a (Drosophila) Neighboring gene TLC domain containing 5a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086007.1 Chromosome 20 Reference fTriRos1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014385.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTriRos1.hap1

Genomic

  1. NC_086007.1 Reference fTriRos1.hap1

    Range
    25145032..25160281
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063017169.1 → XP_062873239.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X1

  2. XM_063017170.1 → XP_062873240.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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