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tph1a tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [ Trichomycterus rosablanca ]

Gene ID: 134321589, updated on 29-Mar-2024

Summary

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Gene symbol
tph1a
Gene description
tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichomycterus rosablanca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Trichomycteridae; Trichomycterus
Orthologs
human zebrafish all
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Genomic context

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See tph1a in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current fTriRos1.hap1 (GCF_030014385.1) 1 NC_085988.1 (44549691..44558601, complement)

Chromosome 1 - NC_085988.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel, Shaw-related subfamily, member 1b Neighboring gene secretion regulating guanine nucleotide exchange factor Neighboring gene serum amyloid A-like 1 Neighboring gene Bet1 golgi vesicular membrane trafficking protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085988.1 Chromosome 1 Reference fTriRos1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan 5-monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aromatic amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in serotonin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan 5-hydroxylase 1a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014385.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTriRos1.hap1

Genomic

  1. NC_085988.1 Reference fTriRos1.hap1

    Range
    44549691..44558601 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063003399.1 → XP_062859469.1  tryptophan 5-hydroxylase 1a

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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