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lama2 laminin, alpha 2 [ Trichomycterus rosablanca ]

Gene ID: 134320408, updated on 29-Mar-2024

Summary

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Gene symbol
lama2
Gene description
laminin, alpha 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichomycterus rosablanca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Trichomycteridae; Trichomycterus
Orthologs
human zebrafish all
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Genomic context

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See lama2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
64
Annotation release Status Assembly Chr Location
RS_2024_02 current fTriRos1.hap1 (GCF_030014385.1) 9 NC_085996.1 (7332552..7462155)

Chromosome 9 - NC_085996.1Genomic Context describing neighboring genes Neighboring gene thymocyte selection associated Neighboring gene protein tyrosine phosphatase receptor type K Neighboring gene enoyl-[acyl-carrier-protein] reductase, mitochondrial Neighboring gene Rho GTPase activating protein 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085996.1 Chromosome 9 Reference fTriRos1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014385.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTriRos1.hap1

Genomic

  1. NC_085996.1 Reference fTriRos1.hap1

    Range
    7332552..7462155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063001777.1 → XP_062857847.1  laminin subunit alpha-2

Nucleotide Protein
Heading Accession and Version

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