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pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [ Trichomycterus rosablanca ]

Gene ID: 134316672, updated on 29-Mar-2024

Summary

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Gene symbol
pomgnt1
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichomycterus rosablanca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Trichomycteridae; Trichomycterus
Orthologs
human zebrafish all
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Genomic context

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See pomgnt1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current fTriRos1.hap1 (GCF_030014385.1) 6 NC_085993.1 (48943374..48966072)

Chromosome 6 - NC_085993.1Genomic Context describing neighboring genes Neighboring gene origin recognition complex, subunit 1 Neighboring gene pre-mRNA processing factor 38A Neighboring gene tetraspanin-1 Neighboring gene calponin homology domain-containing protein DDB_G0272472-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085993.1 Chromosome 6 Reference fTriRos1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014385.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTriRos1.hap1

Genomic

  1. NC_085993.1 Reference fTriRos1.hap1

    Range
    48943374..48966072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062997091.1 → XP_062853161.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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