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unm_hu7910 un-named hu7910 [ Trichomycterus rosablanca ]

Gene ID: 134312244, updated on 29-Mar-2024

Summary

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Gene symbol
unm_hu7910
Gene description
un-named hu7910
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichomycterus rosablanca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Trichomycteridae; Trichomycterus
Orthologs
zebrafish all
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Genomic context

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See unm_hu7910 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2024_02 current fTriRos1.hap1 (GCF_030014385.1) 4 NC_085991.1 (24355868..24430377)

Chromosome 4 - NC_085991.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 7A1 Neighboring gene syndecan binding protein (syntenin) Neighboring gene uncharacterized LOC134312245 Neighboring gene collagen alpha-1(XXVII) chain B-like Neighboring gene gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_085991.1 Chromosome 4 Reference fTriRos1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-aspartic acid 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-aspartic acid hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartyl/asparaginyl beta-hydroxylase; uncharacterized abhydrolase domain-containing protein DDB_G0269086

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014385.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTriRos1.hap1

Genomic

  1. NC_085991.1 Reference fTriRos1.hap1

    Range
    24355868..24430377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062994028.1 → XP_062850098.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X2

  2. XM_062994030.1 → XP_062850100.1  aspartyl/asparaginyl beta-hydroxylase isoform X4

  3. XM_062994031.1 → XP_062850101.1  aspartyl/asparaginyl beta-hydroxylase isoform X5

  4. XM_062994027.1 → XP_062850097.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X1

  5. XM_062994029.1 → XP_062850099.1  uncharacterized abhydrolase domain-containing protein DDB_G0269086 isoform X3

Nucleotide Protein
Heading Accession and Version

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