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traf2b Tnf receptor-associated factor 2b [ Trichomycterus rosablanca ]

Gene ID: 134303606, updated on 29-Mar-2024

Summary

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Gene symbol
traf2b
Gene description
Tnf receptor-associated factor 2b
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichomycterus rosablanca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Trichomycteridae; Trichomycterus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 26
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current fTriRos1.hap1 (GCF_030014385.1) 26 NC_086013.1 (5463935..5493048)

Chromosome 26 - NC_086013.1Genomic Context describing neighboring genes Neighboring gene zinc finger, MYND-type containing 19 Neighboring gene uncharacterized LOC134303548 Neighboring gene B-box and SPRY domain containing Neighboring gene coenzyme Q4 homolog (S. cerevisiae) Neighboring gene uncharacterized LOC134303609 Neighboring gene F-box and WD repeat domain containing 5 Neighboring gene transmembrane protein 203 Neighboring gene aminolevulinate dehydratase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_086013.1 Chromosome 26 Reference fTriRos1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of NF-kappaB transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K63-linked ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TNF receptor-associated factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014385.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTriRos1.hap1

Genomic

  1. NC_086013.1 Reference fTriRos1.hap1

    Range
    5463935..5493048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062989056.1 → XP_062845126.1  TNF receptor-associated factor 2

  2. XM_062989055.1 → XP_062845125.1  TNF receptor-associated factor 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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