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MgCHS1 CHS1 chitin synthase, class I [ Zymoseptoria tritici IPO323 ]

Gene ID: 13403185, updated on 26-Jun-2024

Summary

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Gene symbol
MgCHS1
Gene description
CHS1 chitin synthase, class I
Locus tag
MYCGRDRAFT_98274
Gene type
protein coding
RNA name
CHS1 chitin synthase, class I
RefSeq status
PROVISIONAL
Organism
Zymoseptoria tritici IPO323 (strain: IPO323, type-material: culture from epitype of Zymoseptoria tritici)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; Zymoseptoria
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Genomic context

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See MgCHS1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_018218.1 (1478238..1480998, complement)

Chromosome 1 - NC_018218.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tyrosine protein phosphatase 1 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018218.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. Goodwin SB, et al. PLoS Genet, 2011 Jun. PMID 21695235, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CHS1 chitin synthase, class I
XP_003857614.1
  • chitin synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018218.1 Reference assembly

    Range
    1478238..1480998 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003857566.1 → XP_003857614.1  CHS1 chitin synthase, class I [Zymoseptoria tritici IPO323]

    See identical proteins and their annotated locations for XP_003857614.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X7RDM8, F9WYY3
    Conserved Domains (4) summary
    COG1215
    Location:314 → 638
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:204 → 365
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:129 → 202
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:345 → 561
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Protein Accession Links
GenPept Link UniProtKB Link
EGP92590.1

Gene LinkOut

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Molecular Biology Databases