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MYCGRDRAFT_108196 hypothetical protein [ Zymoseptoria tritici IPO323 ]

Gene ID: 13400962, updated on 14-Dec-2023

Summary

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Gene symbol
MYCGRDRAFT_108196
Gene description
hypothetical protein
Locus tag
MYCGRDRAFT_108196
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Zymoseptoria tritici IPO323 (strain: IPO323, type-material: culture from epitype of Zymoseptoria tritici)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; Zymoseptoria
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Genomic context

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See MYCGRDRAFT_108196 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_018217.1 (2586401..2587010)

Chromosome 2 - NC_018217.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene zinc finger transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018217.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. Goodwin SB, et al. PLoS Genet, 2011 Jun. PMID 21695235, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA replication factor A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018217.1 Reference assembly

    Range
    2586401..2587010
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003855025.1 → XP_003855073.1  uncharacterized protein MYCGRDRAFT_108196 [Zymoseptoria tritici IPO323]

    See identical proteins and their annotated locations for XP_003855073.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1X7RKG3, A0A1Y6LGH0, A0A2H1FYR6, F9X3W2
    Conserved Domains (1) summary
    cl09930
    Location:1 → 102
    RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
Protein Accession Links
GenPept Link UniProtKB Link
EGP90049.1

Gene LinkOut

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Molecular Biology Databases