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CTNS Cystinosin [ Zymoseptoria tritici IPO323 ]

Gene ID: 13400451, updated on 14-Dec-2023

Summary

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Gene symbol
CTNS
Gene description
Cystinosin
Locus tag
MYCGRDRAFT_70938
Gene type
protein coding
RNA name
Cystinosin
RefSeq status
PROVISIONAL
Organism
Zymoseptoria tritici IPO323 (strain: IPO323, type-material: culture from epitype of Zymoseptoria tritici)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; Zymoseptoria
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Genomic context

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See CTNS in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_018215.1 (1038212..1039429, complement)

Chromosome 4 - NC_018215.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018215.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. Goodwin SB, et al. PLoS Genet, 2011 Jun. PMID 21695235, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-cystine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-cystine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Cystinosin
XP_003853481.1
  • cystine transporter cystinosin, transmembranal, CTNS related. PQ loop repeat domains found, critical for the localisation of cystinosin to lysosomes. involved in L-cystine export from lysosomes

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018215.1 Reference assembly

    Range
    1038212..1039429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003853433.1 → XP_003853481.1  Cystinosin [Zymoseptoria tritici IPO323]

    See identical proteins and their annotated locations for XP_003853481.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Y6LLU7, A0A2H1GB34, F9X8W9
    Conserved Domains (1) summary
    TIGR00951
    Location:19 → 263
    2A43; Lysosomal Cystine Transporter
Protein Accession Links
GenPept Link UniProtKB Link
EGP88457.1

Gene LinkOut

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