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CHS2 chitin synthase, class II [ Zymoseptoria tritici IPO323 ]

Gene ID: 13396869, updated on 26-Jun-2024

Summary

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Gene symbol
CHS2
Gene description
chitin synthase, class II
Locus tag
MYCGRDRAFT_100284
Gene type
protein coding
RNA name
chitin synthase, class II
RefSeq status
PROVISIONAL
Organism
Zymoseptoria tritici IPO323 (strain: IPO323, type-material: culture from epitype of Zymoseptoria tritici)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Dothideomycetidae; Capnodiales; Mycosphaerellaceae; Zymoseptoria
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Genomic context

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See CHS2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_018214.1 (1728039..1730903, complement)

Chromosome 5 - NC_018214.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_018214.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis. Goodwin SB, et al. PLoS Genet, 2011 Jun. PMID 21695235, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitin synthase, class II
XP_003852547.1
  • Chitin synthase, Class II

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_018214.1 Reference assembly

    Range
    1728039..1730903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003852499.1 → XP_003852547.1  chitin synthase, class II [Zymoseptoria tritici IPO323]

    See identical proteins and their annotated locations for XP_003852547.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Y6LJL3, F9XBD4
    Conserved Domains (5) summary
    COG1215
    Location:354 → 702
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    COG1277
    Location:594 → 743
    NosY; ABC-type transport system involved in multi-copper enzyme maturation, permease component [Posttranslational modification, protein turnover, chaperones]
    pfam01644
    Location:244 → 405
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:172 → 242
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:344 → 473
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Protein Accession Links
GenPept Link UniProtKB Link
EGP87523.1

Gene LinkOut

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Molecular Biology Databases