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LOC133512217 cobalamin trafficking protein CblD-like [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133512217, updated on 10-Apr-2024

Summary

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Gene symbol
LOC133512217
Gene description
cobalamin trafficking protein CblD-like
See related
EnsemblRapid:ENSSBIG00005003705
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
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Genomic context

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See LOC133512217 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 14 NC_084653.1 (967105..1033163, complement)

Chromosome 14 - NC_084653.1Genomic Context describing neighboring genes Neighboring gene UBX domain protein 4 Neighboring gene integrin, beta 2 Neighboring gene ribosomal RNA processing protein 1 homolog A-like Neighboring gene uncharacterized LOC133512470 Neighboring gene general transcription factor II-I repeat domain-containing protein 2B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084653.1 Chromosome 14 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cobalamin trafficking protein CblD-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084653.1 Reference ASM1980259v1 Primary Assembly

    Range
    967105..1033163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061841629.1 → XP_061697613.1  cobalamin trafficking protein CblD-like isoform X4

  2. XM_061841627.1 → XP_061697611.1  cobalamin trafficking protein CblD-like isoform X2

  3. XM_061841625.1 → XP_061697609.1  cobalamin trafficking protein CblD-like isoform X1

    Related
    ENSSBIP00005007388.1, ENSSBIT00005007631.1

  4. XM_061841628.1 → XP_061697612.1  cobalamin trafficking protein CblD-like isoform X3

Nucleotide Protein
Heading Accession and Version

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