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dnajb6a DnaJ heat shock protein family (Hsp40) member B6a [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133511090, updated on 10-Apr-2024

Summary

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Gene symbol
dnajb6a
Gene description
DnaJ heat shock protein family (Hsp40) member B6a
See related
EnsemblRapid:ENSSBIG00005000352
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
Orthologs
zebrafish all
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Genomic context

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See dnajb6a in Genome Data Viewer
Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 13 NC_084652.1 (24721434..24750069, complement)

Chromosome 13 - NC_084652.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 31 Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene exocyst complex component 3 Neighboring gene glutamate decarboxylase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084652.1 Chromosome 13 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084652.1 Reference ASM1980259v1 Primary Assembly

    Range
    24721434..24750069 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061839695.1 → XP_061695679.1  dnaJ homolog subfamily B member 6a isoform X2

    Related
    ENSSBIP00005000536.1, ENSSBIT00005000658.1

  2. XM_061839694.1 → XP_061695678.1  dnaJ homolog subfamily B member 6a isoform X1

    Related
    ENSSBIP00005000540.1, ENSSBIT00005000662.1
Nucleotide Protein
Heading Accession and Version

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