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LOC133507254 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133507254, updated on 28-Dec-2023

Summary

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Gene symbol
LOC133507254
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
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Genomic context

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See LOC133507254 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 2 NC_084641.1 (9779817..9789729, complement)

Chromosome 2 - NC_084641.1Genomic Context describing neighboring genes Neighboring gene phospholipase A and acyltransferase 1-like Neighboring gene chloride channel, voltage-sensitive 4 Neighboring gene CLIP-associating protein 1-B-like Neighboring gene U4atac minor spliceosomal RNA Neighboring gene uncharacterized LOC133507337 Neighboring gene zinc finger protein GLI2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084641.1 Chromosome 2 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084641.1 Reference ASM1980259v1 Primary Assembly

    Range
    9779817..9789729 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061832110.1 → XP_061688094.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A-like

Nucleotide Protein
Heading Accession and Version

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