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kirrel3b kirre like nephrin family adhesion molecule 3b [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133504533, updated on 10-Apr-2024

Summary

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Gene symbol
kirrel3b
Gene description
kirre like nephrin family adhesion molecule 3b
See related
EnsemblRapid:ENSSBIG00005000680
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
Orthologs
zebrafish all
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Genomic context

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See kirrel3b in Genome Data Viewer
Location:
chromosome: 8
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 8 NC_084647.1 (12970851..13207221)

Chromosome 8 - NC_084647.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133505160 Neighboring gene uncharacterized LOC133504736 Neighboring gene uncharacterized LOC133505089 Neighboring gene BARX homeobox 2 Neighboring gene RNA binding motif protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084647.1 Chromosome 8 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084647.1 Reference ASM1980259v1 Primary Assembly

    Range
    12970851..13207221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061826863.1 → XP_061682847.1  kin of IRRE-like protein 3 isoform X1

  2. XM_061826867.1 → XP_061682851.1  kin of IRRE-like protein 3 isoform X3

  3. XM_061826866.1 → XP_061682850.1  kin of IRRE-like protein 3 isoform X2

  4. XM_061826865.1 → XP_061682849.1  kin of IRRE-like protein 3 isoform X1

    Related
    ENSSBIP00005001113.1, ENSSBIT00005001295.1

  5. XM_061826864.1 → XP_061682848.1  kin of IRRE-like protein 3 isoform X1

  6. XM_061826869.1 → XP_061682853.1  kin of IRRE-like protein 3 isoform X3

    Related
    ENSSBIP00005001124.1, ENSSBIT00005001306.1

  7. XM_061826868.1 → XP_061682852.1  kin of IRRE-like protein 3 isoform X3

  8. XM_061826873.1 → XP_061682857.1  kin of IRRE-like protein 3 isoform X5

  9. XM_061826871.1 → XP_061682855.1  kin of IRRE-like protein 3 isoform X5

  10. XM_061826872.1 → XP_061682856.1  kin of IRRE-like protein 3 isoform X5

  11. XM_061826870.1 → XP_061682854.1  kin of IRRE-like protein 3 isoform X4

Nucleotide Protein
Heading Accession and Version

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