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LOC133503307 torsin-1A-interacting protein 2-like [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133503307, updated on 10-Apr-2024

Summary

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Gene symbol
LOC133503307
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSSBIG00005011175
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
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Genomic context

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See LOC133503307 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 7 NC_084646.1 (13558862..13565586)

Chromosome 7 - NC_084646.1Genomic Context describing neighboring genes Neighboring gene growth hormone releasing hormone receptor, like Neighboring gene FYVE and coiled-coil domain autophagy adaptor 1a Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene chemokine (C motif) receptor 1a, duplicate 1 Neighboring gene uncharacterized LOC133503309 Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_084646.1 Chromosome 7 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084646.1 Reference ASM1980259v1 Primary Assembly

    Range
    13558862..13565586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061824803.1 → XP_061680787.1  torsin-1A-interacting protein 2-like

    Related
    ENSSBIP00005023210.1, ENSSBIT00005024051.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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