U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC133503306 torsin-1A-interacting protein 2-like [ Syngnathoides biaculeatus (alligator pipefish) ]

Gene ID: 133503306, updated on 10-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
LOC133503306
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSSBIG00005011174
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathoides biaculeatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathoides
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC133503306 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_12 current ASM1980259v1 (GCF_019802595.1) 7 NC_084646.1 (13551956..13561969, complement)

Chromosome 7 - NC_084646.1Genomic Context describing neighboring genes Neighboring gene growth hormone releasing hormone receptor, like Neighboring gene FYVE and coiled-coil domain autophagy adaptor 1a Neighboring gene chemokine (C motif) receptor 1a, duplicate 1 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene uncharacterized LOC133503309 Neighboring gene olfactomedin-like 2Ba Neighboring gene activating transcription factor 6

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_084646.1 Chromosome 7 Reference ASM1980259v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_019802595.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1980259v1 Primary Assembly

Genomic

  1. NC_084646.1 Reference ASM1980259v1 Primary Assembly

    Range
    13551956..13561969 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061824802.1 → XP_061680786.1  torsin-1A-interacting protein 2-like isoform X3

  2. XM_061824801.1 → XP_061680785.1  torsin-1A-interacting protein 2-like isoform X2

    Related
    ENSSBIP00005023204.1, ENSSBIT00005024045.1

  3. XM_061824800.1 → XP_061680784.1  torsin-1A-interacting protein 2-like isoform X1

    Related
    ENSSBIP00005023205.1, ENSSBIT00005024046.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.